Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTTGGTTTGCTGAGGA
.(((((((..(((((((((...&)))))))))...)))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001382000
GeneSymbolCCDC144A
Binding site5782,5803
Score0.846
Seed1
Au0.574
Energy-19.3
Binding len21
Me-6.092
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure