Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTATGCCT
....(((((((.((((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001382000
GeneSymbolCCDC144A
Binding site6290,6304
Score0.846
Seed0
Au0.647
Energy-18.7
Binding len14
Me-12.893
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure