Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTAACTGCAGAAGTAGCAGCTGCT
..((((((((..(((((....&.))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382000
GeneSymbolCCDC144A
Binding site4280,4306
Score0.846
Seed1
Au0.618
Energy-19.6
Binding len20
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure