Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCGCGGCGAGCAGG
((((.(((((((((.......&)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382261
GeneSymbolHSPB11
Binding site35,51
Score0.846
Seed0
Au0.206
Energy-20.4
Binding len16
Me-9.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end1
Position5UTR
2D Structure