Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCTCAAGTGATCCTCCCTCCTCAGCCTCCCAAGCAGCTGCAAC
(((((((((((((((..(((.&.)))...)))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382266
GeneSymbolRNFT2
Binding site3386,3434
Score0.923
Seed1
Au0.412
Energy-25.0
Binding len29
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure