Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAACCTGGCTGCAGA
(((((((((.(((((......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382358
GeneSymbolHNRNPCL3
Binding site588,603
Score0.897
Seed1
Au0.5
Energy-17.5
Binding len15
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure