Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTTCCAGAAGGGCACTCCCATCCAGCCAGG
..((((((((((((((((.((.&)).))))))))))...........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351727
GeneSymbolRAPGEF2
Binding site4660,4691
Score0.923
Seed1
Au0.441
Energy-24.9
Binding len31
Me-4.957
Phylopstem5.20138217037037
Phylopflank4.422016415
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure