Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTACAGCCTGCAGCTT
....(((((((((((((..((&)).))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382391
GeneSymbolCSPP1
Binding site1793,1811
Score0.885
Seed0
Au0.515
Energy-19.8
Binding len18
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure