Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTTCAAACTGGTTGCCAGGTT
((((((((..((..........&.))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001382525
GeneSymbolSPDYE8
Binding site341,363
Score1.0
Seed1
Au0.559
Energy-17.6
Binding len14
Me-9.351
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure