Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGCTGCCCAGCTGCC
..(((((((.(((.((..((.&))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351736
GeneSymbolRPUSD3
Binding site927,945
Score1.0
Seed1
Au0.324
Energy-20.2
Binding len18
Me-7.056
Phylopstem0.1992004285714286
Phylopflank0.18705416874999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure