Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCAACCGCAGCCCCAGG
(((..((((((((((...(((&)))..))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382555
GeneSymbolSPDYE12
Binding site606,627
Score1.0
Seed0
Au0.397
Energy-22.8
Binding len21
Me-11.322
Phylopstem0.8572989999999999
Phylopflank0.37034713499999994
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure