Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCCCATGAGCGAGAGACTCCTAGGAGAGCCGCAGCC
.....(((((((((.(.(((.&.)))...).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382555
GeneSymbolSPDYE12
Binding site49,90
Score0.846
Seed0
Au0.426
Energy-19.8
Binding len19
Me-14.401
Phylopstem0.19162421111111114
Phylopflank0.33343559625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure