Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGACGGCCCGCGGTTGG
...(((((((((((((..(((&)))..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382566
GeneSymbolSTIM1
Binding site219,239
Score0.846
Seed0
Au0.338
Energy-22.2
Binding len20
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure