Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGCTGCCCAGCTGCC
..(((((((.(((.((..((.&))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351737
GeneSymbolRPUSD3
Binding site762,780
Score0.846
Seed1
Au0.324
Energy-20.2
Binding len18
Me-7.056
Phylopstem5.301622857142858
Phylopflank5.4555241927500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure