Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTAAGCAGGAAGCCCAGCGGCTGA
...((((((((((((((((((&))))))).........))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382577
GeneSymbolSTIM1
Binding site986,1016
Score0.923
Seed0
Au0.441
Energy-21.5
Binding len30
Me-6.515
Phylopstem6.124768
Phylopflank5.18770849875
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure