Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTAAGCAGGAAGCCCAGCGGCTGA
...((((((((((((((((((&))))))).........))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382578
GeneSymbolSTIM1
Binding site865,895
Score0.923
Seed0
Au0.441
Energy-21.5
Binding len30
Me-6.515
Phylopstem4.001052103448276
Phylopflank4.8407166375
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure