Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGCTGCCCAGCTGCC
..(((((((.(((.((..((.&))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351738
GeneSymbolRPUSD3
Binding site930,948
Score0.949
Seed1
Au0.324
Energy-20.2
Binding len18
Me-7.056
Phylopstem1.5736058142857143
Phylopflank1.40040916875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure