Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGACTTCTGCAGCTGGAGG
((.(((((((((..((.((((&)))).))..))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351739
GeneSymbolITPA
Binding site554,576
Score1.0
Seed0
Au0.368
Energy-22.5
Binding len22
Me-7.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure