Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCGGCTGCC
..((((((((...(((.((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382720
GeneSymbolTMPRSS2
Binding site2014,2030
Score0.923
Seed1
Au0.324
Energy-19.8
Binding len16
Me-12.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure