Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGGGGCTGTGGA
((((((((.(((((((.....&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351750
GeneSymbolDCTD
Binding site1577,1594
Score0.923
Seed1
Au0.353
Energy-21.4
Binding len17
Me-4.994
Phylopstem5.11838875
Phylopflank4.5424337462499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure