Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTGGATGCAGCTGTGCAGGCTGTGAG
(((((((((((((((((((((&)))).......)))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351761
GeneSymbolTRMT1
Binding site746,778
Score0.846
Seed1
Au0.397
Energy-21.4
Binding len32
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure