Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGACATCCAGCTGCAAT
(((((((((.((.(((..(((&)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384125
GeneSymbolKIAA1109
Binding site5322,5342
Score0.962
Seed1
Au0.574
Energy-21.1
Binding len20
Me-6.469
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure