Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACACGAGCGCGCAGCTGG
...(((((((((((((.((((&)))))))...)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384340
GeneSymbolHOXA3
Binding site1134,1156
Score0.923
Seed0
Au0.353
Energy-21.9
Binding len22
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure