Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCCCAGCTGCC
..(((((((.((((((..(((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384388
GeneSymbolFCHO1
Binding site2138,2156
Score0.846
Seed1
Au0.368
Energy-24.1
Binding len18
Me-6.2
Phylopstem0.2914525714285715
Phylopflank1.8071964137500003
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure