Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTTGCATGGACCAGGAGCGGCTGCGGA
(((((((((((((((((((((&))).)))))...)))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384388
GeneSymbolFCHO1
Binding site641,671
Score0.846
Seed1
Au0.397
Energy-23.5
Binding len30
Me-3.938
Phylopstem3.9750833793103446
Phylopflank4.139604866249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure