Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCCCAGCTGCC
..(((((((.((((((..(((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384393
GeneSymbolFCHO1
Binding site2060,2078
Score0.923
Seed1
Au0.368
Energy-24.1
Binding len18
Me-6.2
Phylopstem2.453458714285714
Phylopflank2.4329313600000004
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure