Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCCCAGCTGCC
..(((((((.((((((..(((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384395
GeneSymbolFCHO1
Binding site2174,2192
Score0.827
Seed1
Au0.368
Energy-24.1
Binding len18
Me-6.2
Phylopstem-0.43096557142857134
Phylopflank2.7209612187500003
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure