Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTAGCTGTGGCTCCAGC
(((.(((((((((((.(((((&))))).))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351805
GeneSymbolARNTL
Binding site1840,1862
Score0.808
Seed0
Au0.426
Energy-21.2
Binding len22
Me-7.203
Phylopstem4.867433454545455
Phylopflank5.061192473749999
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure