Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAACCTCAGCTGCC
..(((((((.(((((......&))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351805
GeneSymbolARNTL
Binding site1228,1242
Score0.923
Seed1
Au0.485
Energy-19.4
Binding len14
Me-6.433
Phylopstem7.016979999999999
Phylopflank5.2481248485
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure