Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGTGCTAGCTGCGC
.((((((((((((((((....&)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384500
GeneSymbolIFNAR1
Binding site2394,2414
Score0.923
Seed1
Au0.412
Energy-23.6
Binding len20
Me-3.793
Phylopstem-0.4449987515789473
Phylopflank-0.06821578049999998
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure