Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGTGCTAGCTGCGC
.((((((((((((((((....&)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384503
GeneSymbolIFNAR1
Binding site2355,2375
Score0.846
Seed1
Au0.412
Energy-23.6
Binding len20
Me-3.793
Phylopstem-0.5029155778947368
Phylopflank-0.44699810549999996
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure