Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTGCTGCAGGGACATGCT
..(((((((((((.(((((((&))))))).)))))))...).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384542
GeneSymbolUSP49
Binding site1932,1956
Score0.923
Seed1
Au0.515
Energy-21.7
Binding len24
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure