Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGGGGCCGCCGGAGGGCCTGGGCCGAGCTGCT
..((((((.(((((...((((&.)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351830
GeneSymbolFANCA
Binding site72,109
Score0.923
Seed1
Au0.324
Energy-21.6
Binding len18
Me-6.982
Phylopstem-1.0705911666666668
Phylopflank-0.307003875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure