Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGCGGCTGCAGCA
.....(((((((((((.((((&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384602
GeneSymbolPLEKHG6
Binding site1319,1336
Score0.923
Seed0
Au0.338
Energy-21.6
Binding len17
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure