Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCAGCCACAGCAGCAGCCCCCGCCGCAGCTGCAGCTGCAGC
((((((((((((((((..(((&.))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384609
GeneSymbolSLITRK5
Binding site3249,3296
Score0.923
Seed1
Au0.265
Energy-30.7
Binding len21
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure