Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGCTGGGCGCAGCGGCTCA
.((((((((.((((.(((...&)))..)))))))).)).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001351834
GeneSymbolATM
Binding site9631,9651
Score0.885
Seed1
Au0.426
Energy-22.1
Binding len20
Me-5.771
Phylopstem-0.9453828999999999
Phylopflank-0.04459045875000003
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure