Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGAAAATGTTCATCCCAGCTGCGGA
(((((((((.((((.(((((.&))))).))..........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351834
GeneSymbolATM
Binding site11452,11482
Score1.0
Seed1
Au0.559
Energy-20.9
Binding len30
Me-5.916
Phylopstem0.1554591111111111
Phylopflank0.06261175025000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure