Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCCCTTGCCAGGC
.(((((((......(((((...&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001384649
GeneSymbolPRDM11
Binding site2666,2683
Score1.0
Seed1
Au0.353
Energy-17.6
Binding len17
Me-14.41
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure