Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATAGACTTGTAGCTGCT
..((((((((((((...((((&))))...)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384714
GeneSymbolCTSB
Binding site2721,2742
Score1.0
Seed1
Au0.515
Energy-21.9
Binding len21
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure