Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCAACCGCTCCGGCAACGCCAACCGCTCCGCTGCGC
.((((((.(((((((......&.)))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384724
GeneSymbolCTSB
Binding site12,51
Score0.846
Seed1
Au0.25
Energy-21.5
Binding len18
Me-6.34
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end2
Position5UTR
2D Structure