Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGACGCGGCTCAAA
(((.((((((.(((((((((.&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384728
GeneSymbolCTSB
Binding site1839,1858
Score0.923
Seed0
Au0.544
Energy-21.6
Binding len19
Me-9.794
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure