Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGAGGCCGGGTC
(((((((.....((((((....&))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001384747
GeneSymbolHOXB3
Binding site345,362
Score0.846
Seed1
Au0.279
Energy-18.7
Binding len17
Me-14.722
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure