Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAACGGCAGCTGCAT
.(((((((((.((((......&.)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384747
GeneSymbolHOXB3
Binding site333,351
Score1.0
Seed1
Au0.324
Energy-24.2
Binding len16
Me-6.851
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure