Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTGCTGCGGTTCAGT
(((.(((((((((.(.(((((&))))).).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384889
GeneSymbolSTAT1
Binding site2100,2121
Score0.923
Seed0
Au0.368
Energy-19.0
Binding len21
Me-8.059
Phylopstem4.594397006666667
Phylopflank4.65479753975
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure