Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCTGGAACCTTGCCCAGCACAGGTGGCTGCT
..(((((((((((((((((((&.)))))))..))).)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001384947
GeneSymbolCOL14A1
Binding site211,248
Score0.846
Seed1
Au0.485
Energy-20.7
Binding len26
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure