Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGCATTGTGCTGGGTG
(((((((..((((((((((...&)))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001351968
GeneSymbolCMC2
Binding site3668,3687
Score0.846
Seed1
Au0.544
Energy-18.3
Binding len19
Me-7.308
Phylopstem0.4927350636363636
Phylopflank0.08069839625000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure