Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351968
GeneSymbolCMC2
Binding site5474,5497
Score0.923
Seed1
Au0.426
Energy-26.9
Binding len23
Me-10.109
Phylopstem0.18785923636363633
Phylopflank-0.2592562387500001
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure