Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAACTGTAGCCGCAGT
((((.(((((((((((.((((&))))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351968
GeneSymbolCMC2
Binding site6397,6418
Score0.808
Seed0
Au0.588
Energy-26.4
Binding len21
Me-8.057
Phylopstem-0.4386107363636364
Phylopflank-0.19386509749999997
Longest consecutive pairings15
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure