Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGACAATCTGGAAGTCAGCAGCTTCCAGCTGCAGT
(((((((((.((((((.....&.))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351968
GeneSymbolCMC2
Binding site1492,1532
Score0.974
Seed1
Au0.456
Energy-22.3
Binding len19
Me-5.18
Phylopstem0.4540848133333333
Phylopflank0.17830949999999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure