Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATGCTCGCAGCTGCC
..((((((((((((((.....&))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385174
GeneSymbolUSP36
Binding site713,730
Score0.923
Seed1
Au0.412
Energy-21.3
Binding len17
Me-4.957
Phylopstem3.120743275
Phylopflank3.2613245849999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure